====== Ecolego Wiki ====== ==== What is Ecolego? ==== * [[Ecolego|Ecolego]] * Extensions (Ecolego toolboxes) * [[ode_toolbox|Ordinary Differential Equation toolbox]] * [[Sensitivity analysis toolbox|Sensitivity analysis toolbox]] * [[Radionuclide toolbox|Radionuclide toolbox]] * [[Parameter database toolbox|Parameter database toolbox]] * Related products * [[Ecolego player|Ecolego Player]] * [[Parameter database|Facilia Parameter Database]] ==== Installing and operating Ecolego ==== * [[Installing and operating Ecolego|System requirements]] * [[Installing and operating Ecolego|Installing Ecolego]] * [[Installing and operating Ecolego|Starting Ecolego]] ==== Getting started with Ecolego ==== * [[Tutorials|Tutorials]] * [[Tutorial 1-Creating a simple model|1 - Creating a simple model]] * [[Tutorial 2-Creating a compartment model|2 - Creating a compartment model]] * [[Tutorial 3-Using index lists|3 - Using index lists 1]] * [[Tutorial 4-Using index lists (Advanced)|4 - Using index lists 2 (Advanced)]] * [[Tutorial 5-Re-useable Components|5 - Re-useable Components]] * [[Tutorial 6-Dicrete Events|6 - the Discrete block]] * [[Tutorial 7-Transport|7 - the Transport Block]] * [[Tutorial 8-Creating custom functions|8 - Creating custom functions]] * [[Tutorial 15-Lotka-Volterra model|15 - the Lotka-Volterra model]] * [[Video tutorials]] * [[https://www.youtube.com/watch?v=LpWO_UG-mb0|Creating tables]] ==== Ecolego basics ==== * [[Project|Handling projects]] * [[Project#CreateProject|Creating a project]] * [[Project#OpenProject|Opening a project]] * [[Project#CloseProject|Closing a project]] * [[Project#SaveProject|Saving a project]] * [[Project#SaveAssess|Saving an assessment]] * [[Project#ChangeProject|Changing the name of a project]] * [[Project#EditProject|Editing project properties]] * Workbench * [[Menu bar|Menu bar]] * [[File menu|File menu]] * [[Edit menu|Edit menu]] * [[Simulation menu|Simulation menu]] * [[Window menu|Window menu]] * [[Script menu|Script menu]] * [[Help menu|Help menu]] * [[Preferences|Preferences]] * [[Menu_bar#Toolbar|Toolbar]] * [[Workbench#Window_layouts|Window layout]] * [[Modeling layout|Modeling layout]] * [[Simulation layout|Simulation layout]] * Settings * [[Editing properties|Editing properties]] * [[Windows|Windows]] * [[Blocks window|Blocks window]] * [[Charts window|Charts window]] * [[Errors window|Errors window]] * [[Graph window|Graph window]] * [[History window|History window]] * [[Index lists window|Index lists window]] * [[Information window|Information window]] * [[Materials window|Materials window]] * [[Matrix window|Matrix window]] * [[Nuclide database window|Nuclide database window]] * [[Projects window|Projects window]] * [[Radionuclide decay window|Radionuclide decay window]] * [[Relationships window]] * [[Results window|Results window]] * [[Report window|Report window]] * [[Scenarios window|Scenarios window]] * Sensitivity analysis window * [[Simulations window|Simulations window]] * [[Tables window|Tables window]] * Conventions * [[Naming_conventions|Naming conventions]] * [[Numerical_conventions|Numerical conventions]] * [[Units|Units]] * [[Errors_window#Errors|Error messages]] ==== Creating a model ==== * Creating a model * [[Interaction matrix|Using the interaction matrix]] * [[Organizing the interaction matrix|Organizing the interaction matrix]] * [[Box diagram|Using a box diagram]] * [[Block|Building blocks]] * Common blocks * [[Compartment|Compartment]] ([[ODE toolbox|ODE toolbox]]) * [[Expression|Expression]] * [[Lookup table|Lookup table]] * [[Parameter|Parameter]] * Connecting blocks * [[Connector|Connector]] * [[Influence|Influence]] * [[Transfer|Transfer]] ([[ODE toolbox|ODE toolbox]]) * Special blocks * [[Aggregate|Aggregate]] * [[Delay|Delay]] ([[ODE toolbox|ODE toolbox]]) * [[Discrete event|Discrete event]] * [[General variable|General variable]] * [[Index operation|Index operation]] * [[Mass balance|Mass balance]] * [[Min max|Min/Max]] * [[Running mean|Running mean]] * [[Snapshot|Snapshot]] * [[Source Sink|Source/Sink]] * [[Transport|Transport]] ([[ODE toolbox|ODE toolbox]]) * [[Transport begin|Transport begin]] * [[Transport end|Transport end]] * [[Transport N|Transport N]] * [[Transport operation|Transport operation]] * [[Sub-system|Sub-systems]] * [[Sub-system#Create|Creating sub-systems]] * [[Sub-system#Edit|Editing a sub-system]] * [[Sub-system#Delete|Deleting sub-systems]] * [[Model input|Model input]] * [[Model output|Model output]] * [[Material|Materials]] * [[Material#Add|Adding a new material]] * [[Material#Edit|Editing materials]] * [[Material#Radio|Radionuclides]] * [[Index list|Index lists]] * [[Index list#Build|Built-in index lists]] * [[Index list#Create|Creating an index list]] * [[Index list#Edit|Editing an index list]] * [[Mapped index list|Mapped index list]] * [[Sub-set index list|Sub-set index list]] * [[Scenario|Scenarios]] * [[Events]] * [[Undo/Redo]] * [[Data transfer|Data transfer]] * [[Expression syntax|Expression syntax]] ==== Running a simulation ==== * [[Running simulations|Running simulations]] * [[Simulation settings|Simulation settings]] * Simulation types * [[Deterministic simulations|Deterministic simulations]] * [[Probabilistic simulation|Probabilistic simulation]] * [[Sensitivity analysis|Sensitivity analysis (Sensitivity analysis toolbox)]] * [[Scenario|Scenarios]] * [[Parameter optimization|Parameter optimization]] * [[Parameter optimization#Select|Selecting optimization parameters]] * [[Parameter optimization#Target|Selecting output targets]] * [[Parameter optimization#Set|Optimization settings]] * [[Parameter optimization#Result|Optimization results]] * [[Results_window#Creating charts and tables|Creating charts and tables]] * [[Chart|Charts]] * [[Time chart|Time chart]] * [[Scatter chart|Scatter chart]] * [[Histogram chart|Histogram chart]] * [[Tornado chart|Tornado chart]] * [[Correlation pie chart|Correlation pie chart]] ([[Sensitivity analysis toolbox|Sensitivity analysis toolbox]]) * [[Correlation time chart|Correlation time chart]] ([[Sensitivity analysis toolbox|Sensitivity analysis toolbox]]) * [[Morris chart|Morris chart]] ([[Sensitivity analysis toolbox|Sensitivity analysis toolbox]]) * [[Table|Tables]] * [[Time table|Table]] * [[Correlation table|Correlation table]] ([[Sensitivity analysis toolbox|Sensitivity analysis toolbox]]) ==== Exporting and importing data ==== * [[Exporting and importing data|Exporting and importing data]] * Parameters and lookup tables * [[Importing parameters to Ecolego|Importing from Excel]] * [[Exporting parameters to Excel|Exporting to Excel]] * [[Importing parameters to Ecolego|Importing from the database]] ([[Parameter database toolbox|Parameter database toolbox]]) * [[Exporting parameters to the database|Exporting to the database]] ([[Parameter database toolbox|Parameter database toolbox]]) * [[Quick parameter import|Quick import]] ([[Parameter database toolbox|Parameter database toolbox]]) * [[Setting up an external database|Setting up an external database]] ([[Parameter database toolbox|Parameter database toolbox]]) * Index lists * [[Importing index lists to Ecolego|Importing from Excel]] * [[Importing index lists to Ecolego|Importing from the database]] ([[Parameter database toolbox|Parameter database toolbox]]) * Using JSON * [[Import data from JSON|Import data from JSON ]] * [[Export|Export data to JSON]] * Radionuclides * [[Importing nuclides|Importing nuclides]] ([[Radionuclide toolbox|Radionuclide toolbox]]) * [[Importing decay chains|Importing decay chains]] ([[Radionuclide toolbox|Radionuclide toolbox]]) * [[Material|Creating materials]] ([[Radionuclide toolbox|Radionuclide toolbox]]) * Functions * [[Creating custom functions|Creating custom functions]] * Documents * [[Document|Importing documents]] * Images * [[Exporting the interaction matrix|Exporting the interaction matrix]] * [[Library|Library]] * [[Library#Add|Adding sub-systems to the library]] * [[Library#Retrieve|Retrieving sub-systems from the library]] * [[Library#Manage|Managing the library]] * [[Lite report|Lite report]] ==== Scripting ==== * [[Scripting|Overview]]